PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916183.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 1275aa    MW: 140944 Da    PI: 4.961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916183.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.92.4e-24742131128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tks 80 
                     lp+G++F+P+d +l+  +L++kv + +      +++  +i+++d      +++P++Lp  vk++ +  yfF+++ k y+t++ k+ +      ++
  XP_010916183.1  74 LPRGVKFDPSDGDLL-WHLRAKVGKGEadphplISE--FITSLDkddgFGYTHPQKLP-GVKKDGSVSYFFHRSFKIYNTKNPKHWTvhnddSED 164
                     699************.88****99998777655222..34443333348999******.677788899**********98775555423333568 PP

             NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +W++ gk+++v++ +g++ g kk++v+y   ++ +k+ek++Wvmh+y+l
  XP_010916183.1 165 IFWQKVGKTRPVIV-DGSHQGGKKIMVLYasMKKGKKPEKSNWVMHQYHL 213
                     99************.9999**********7645677778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-2767231IPR003441NAC domain
PROSITE profilePS5100525.14274231IPR003441NAC domain
PfamPF023653.3E-1175213IPR003441NAC domain
PROSITE profilePS513797.248495526IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1275 aa     Download sequence    Send to blast
MDSAIAIDGS TDKVKIRAGD KCWMDDLDYM PLIKRRRLLL SSTSSPSVPV YSKPPVDMAV  60
KRVSPGASQE WPGLPRGVKF DPSDGDLLWH LRAKVGKGEA DPHPLISEFI TSLDKDDGFG  120
YTHPQKLPGV KKDGSVSYFF HRSFKIYNTK NPKHWTVHND DSEDIFWQKV GKTRPVIVDG  180
SHQGGKKIMV LYASMKKGKK PEKSNWVMHQ YHLGTGNGKE RELVVSKIFY ENAQGLSPET  240
VKAIVAEAET LIVAKLTTGY HETKCNENRV GAGWRELDEY DNCSTEDSKQ RKIKSQVLSD  300
VHQSAEGFLA GGKLHQEQSS CAAESWRTRS CISDDVQANV KILKNNLKDI SMGDCDLVSE  360
GNKTSGLVVS IAMTSDLVRP CSLNAADSNS EHLPDASSLG DTQEYISSSN LIASSGFKGH  420
TVEQGGNDLL QLSNLPDHST GIKVEHSDYM QTNPQKEGLE DTDMEVFIRE SEKEDLDHVT  480
LQERCNMLLS STYSVSGDLN GSRWCQDCSA CTSKPCPNSV LHAQDGGFIS RSEKDGTLTN  540
HLGTENCGQD ILGLLQDISS GPFIHPPSAQ LPIGECCADS VPESNDAKSM NNLMFDSPDS  600
ATAGFDPYLQ TSLNCQLSIL LQDSHSLENH ENNYISVYQT SRPEVKPQVQ SNKCVSDHSQ  660
PLCSELSAQQ VQLKVEPLEE DFPKNISGIN AAVPHSADKN SPEEDCTAST CTATPCTPDA  720
DMSCLRQTPV DQNDSNQVYN SILPTFPVEV KVEPLEESRI NSVPEANAEN HLSLLLSNYS  780
TEVFRAHTQL SKDDHFQVNS SFNGNNSQEN MSTNYLCSDQ NSVPENVINS EAPKLQSSKI  840
PGFMSGTSLE NSCTVSQSSA KAGNHDNISS SGDSLFEESG RNCSGQVSFL EKEHAGASNI  900
LSNSVQVKTE PLESDLLSMC ENHLSSFPES DTLGANVKRE TLDELSVDVI DPIKVGHAMM  960
PISGIVSNLD YGNNLNCSQQ AVPYYLIDGS INSINAKSSH FSLRRRRKKT ATDSVETALE  1020
EDAPGLLQVL LDKGITVEEI KLYGDVEDDE PLEVSSTDDS FEELETVMTK LFSERASLIK  1080
LSTARHIKGS KAVYCLACLI SLIEQTRYLH FRNSSVEWGW CRDLQSFIFV FKRHNRIVLE  1140
RPEYGYATYF FELVDSLPIP WQIKRLVTAM KLTSCSRTTL IENKPLLVGE DLTEGEACVL  1200
EEYGWTPNTG LGTMLNYCDR VVHDKKNERY SSEWRAKIGR LLMIGHDGGR TVLTNLPKKV  1260
AQFMENRNQE IKLIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13337KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916183.10.0PREDICTED: uncharacterized protein LOC105041085 isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-56NAC family protein